There’s a lot of those, so they’re pretty hard to pick, not to mention these types of lists constantly shift around for me. As of now, though, I’d rank them like this:

12. Zelda II
11. Ocarina of Time
10. Minish Cap
9. Zelda I
8. Wind Waker
7. Majora’s Mask
6. Link’s Awakening
5. Skyward Sword
4. A Link Between Worlds
3. Twilight Princess
2. A Link to the Past
1. Breath of the Wild