The main problem with intelligent design is that this universe is NOT perfect. Sure its nigh impossible that life evolved the way it did, but there are also infinite outcomes. And when there are infinite outcomes even an improbable outcome becomes certain.

The universe does not work like a clock. There are many underlying factors. In the physical plane, objects work according to their laws. Apply non-euclidean theories. Relativity theories. Then we have another plane to work with. We exist in four dimensions. Intelligent design and the clockwork universe theory rely on the belief that time is infalliable, and that we are only affected in three dimensions. Einstein's theory states that as an object approaches the speed of light, time slows down. As time can be experimented on, we must assume that it can be altered in the same way as matter , and is subject to its own laws. Probability applies to it too, as with the rest of the universe. Due to the fact that there are infinite chances of it happening, an unlikely event becomes certain. Right now a pocket of space time is tearing it self open between two points in the universe. As I said before, if there are infinite possibilities, and infinite chances for each possibility, then an outcome becomes certain.

If this universe follows mathematical law, then all laws of probability apply. When the laws of probability are applied, everything becomes uncertain. The fact that uncertainties exist disprove an orderly universe. Of course, when probability is applied all laws become false, as there exists a possibility of something different happening. All things are uncertain.